Eukaryotic models
Chlorella vulgaris https://github.com/cristalzucsd/Chlorella
Bacterial models
Staphylococcus aureus https://github.com/cristalzucsd/Staphylococcus
Nitrosomonas europaea https://github.com/cristalzucsd/Nitrosomonaseuropaea
Candidatus Liberibacter spp. https://github.com/cristalzucsd/Liberibacter
Azotobacter vinelandii https://github.com/cristalzucsd/AvinelandiiDJ
Dynamic biomass
Phototrophs Chlorella vulgaris and Phaeodactylum tricornutum and heterotrophs Chinese Hamster Ovary cells, Saccharomyces cerevisiae, and Yarrowia lipolytica https://github.com/cristalzucsd/sensitivityAnalysis
Community metabolic models (CM-models)
Chlorella – Saccharomyces https://github.com/cristalzucsd/PhototrophicCommunities
Sucrose-secreting Synechococcus elongatus cscB with heterotrophic Escherichia coli K-12, Escherichia coli W, Yarrowia lipolytica, or Bacillus subtilis https://github.com/cristalzucsd/SyntheticMicrobialCommunities