Models

Eukaryotic models

Chlorella vulgaris https://github.com/cristalzucsd/Chlorella

Bacterial models

Staphylococcus aureus https://github.com/cristalzucsd/Staphylococcus

Nitrosomonas europaea https://github.com/cristalzucsd/Nitrosomonaseuropaea

Candidatus Liberibacter spp. https://github.com/cristalzucsd/Liberibacter

Azotobacter vinelandii https://github.com/cristalzucsd/AvinelandiiDJ

Dynamic biomass

Phototrophs Chlorella vulgaris and Phaeodactylum tricornutum and heterotrophs Chinese Hamster Ovary cells, Saccharomyces cerevisiae, and Yarrowia lipolytica https://github.com/cristalzucsd/sensitivityAnalysis

Community metabolic models (CM-models)

Chlorella – Saccharomyces https://github.com/cristalzucsd/PhototrophicCommunities

Sucrose-secreting Synechococcus elongatus cscB with heterotrophic Escherichia coli K-12, Escherichia coli W, Yarrowia lipolytica, or Bacillus subtilis https://github.com/cristalzucsd/SyntheticMicrobialCommunities